Jianhe Guo1 Donglei (Emma) Fan1 2

1, Materials Science and Engineering, The University of Texas at Austin, Austin, Texas, United States
2, Department of Mechanical Engineering, The University of Texas at Austin, Austin, Texas, United States

Efficient capture of deoxyribonucleic acid (DNA) on solid surfaces has received immerse research interest for various biotechniques, including DNA extraction, preconcentration, detection, and separation. This work reports an original mechanism to actively accelerate the DNA capture process and significantly reduce the detection time by mechanically rotating bio-photonic-plasmonic hybrid microsensors. The photonic-plasmonic microsensors consist of diatom frustules with surface-coated magnetic thin films and uniformly distributed plasmonic silver (Ag) nanoparticles. The diatom frustules are made of silica with ordered arrays of nanopores offering large surface-to-volume ratio and synergistic-plasmonic resonance for the capture and detection of DNA with surface enhanced Raman spectroscopy (SERS). By manipulating with magnetic tweezers, the photonic-plasmonic microsensors transport and self-assemble in microwells and microfluidic channels, and rotate with tunable speeds for the capture and detection of DNA molecules. Experiments show the capturing rate of DNA can be significantly enhanced by at least 4 times by controlling the rotation speed of the microsensor to 1200 rpm. At a concentration as low as 80 nM/ml, Raman signals of DNA is obtained 3-time faster than those without rotation. The fundamental mechanism is investigated and attributed to the fluidic boundary layer effect, where the Nernst diffusion layer on the surface of the robotized microsensors is monotonically reduced with flow speed.